The detailed information of tRNA gene sequence


Sequence ID>SRA1004643
Genome IDSRR006906.93037
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 238
End posion on genome 162
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
ngcccgcatt
tRNA gene sequence 
CGGTGATTGGCGCAGCCTGGTAGCGCACTTCGTTCGGGACGAAGGGGTCGGAGGTTCGAA
TCCTCTATCACCGACCA
Downstream region at tRNA end position 
aattcagaaa
Secondary structure (Cloverleaf model)
>SRA1004643	Pro	CGG
                   t      ACCA aattcagaaa
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     T - A          T A
                    T     T C T C C     A
      C G A        G      + | | | |     G
    C       C G C G       G G A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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