The detailed information of tRNA gene sequence


Sequence ID>SRA1004648
Genome IDSRR006906.93967
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 157
End posion on genome 81
Amino Acid Asn
Anticodon GTT
Upstream region at tRNA start position 
nnnnnnnata
tRNA gene sequence 
GTCCCCTTAGCTCAGTTGGTTAGAGCGACGGACTGTTAATCCGCAGGTCCCCCGTTCGAG
TCGGGGAGGGGGAGCCA
Downstream region at tRNA end position 
attccacgaa
Secondary structure (Cloverleaf model)
>SRA1004648	Asn	GTT
                   a      GCCA attccacgaa
                     G   A
                     T + G
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     G G G G C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C C G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    A   C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G T T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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