The detailed information of tRNA gene sequence


Sequence ID>SRA1004661
Genome IDSRR006906.96168
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 158
End posion on genome 234
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcacaagac
tRNA gene sequence 
GGCTATGTAGCTCAGTTGGTTAGAGCATCGCACTCATAATGCGGGGGTCACAGGTTCGAA
TCCCGTCATAGCCACCA
Downstream region at tRNA end position 
ttattcttgc
Secondary structure (Cloverleaf model)
>SRA1004661	Met	CAT
                   c      ACCA ttattcttgc
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     T - A
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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