The detailed information of tRNA gene sequence


Sequence ID>SRA1004662
Genome IDSRR006906.96339
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 72
End posion on genome 147
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gtgactgtat
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCCTGCCTTGCACGCAGGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
tatagtccgg
Secondary structure (Cloverleaf model)
>SRA1004662	Ala	TGC
                   t      ACCA tatagtccgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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