The detailed information of tRNA gene sequence


Sequence ID>SRA1004666
Genome IDSRR006906.98003
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 108
End posion on genome 33
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttccctaatc
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCATGTGTTCAAGT
CACATAGGGGCCACCA
Downstream region at tRNA end position 
aattgcaaaa
Secondary structure (Cloverleaf model)
>SRA1004666	Met	CAT
                   c      ACCA aattgcaaaa
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          T G
                    T     T A C A C     A
      T G A        A      | | | | |     A
    G       C T C G       A T G T G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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