The detailed information of tRNA gene sequence


Sequence ID>SRA1004668
Genome IDSRR006906.98046
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 169
End posion on genome 244
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
caccctaatt
tRNA gene sequence 
AGGGGCGTAGTTCAATTGGTAGAGCACCGGTCTCCAAAACCGGGTGTTGGGAGTTCGAGT
CTCTCCGCCCCTGCCA
Downstream region at tRNA end position 
gaaataatcc
Secondary structure (Cloverleaf model)
>SRA1004668	Trp	CCA
                   t      GCCA gaaataatcc
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T A A        A      | + | | |     G
    T       C T T G       G G G A G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GTGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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