The detailed information of tRNA gene sequence


Sequence ID>SRA1004670
Genome IDSRR006906.98434
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 51
End posion on genome 124
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaaaagttt
tRNA gene sequence 
GGCGCGTTAACAAAGCGGTTATGTAGCGGATTGCAAATCCGTCTAGTCCGGTTCGACTCC
GGAACGCGCCTCCA
Downstream region at tRNA end position 
atttttcccg
Secondary structure (Cloverleaf model)
>SRA1004670	Cys	GCA
                   t      TCCA atttttcccg
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     A G G C C     A
        G A        A      | | | | |     G
      C     A A C A       T C C G G     C
      G       | | |                 T T
      G     A T G T
        T T        A     CTAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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