The detailed information of tRNA gene sequence


Sequence ID>SRA1004672
Genome IDSRR006906.98997
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 188
End posion on genome 115
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcaaggtaa
tRNA gene sequence 
GGCGCGTTGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTGAACCTCGGTTCGACTCC
GGGACGCGCCTCCA
Downstream region at tRNA end position 
ttctctcctt
Secondary structure (Cloverleaf model)
>SRA1004672	Cys	GCA
                   a      TCCA ttctctcctt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     GAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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