The detailed information of tRNA gene sequence


Sequence ID>SRA1004676
Genome IDSRR006906.100313
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 181
End posion on genome 106
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
ccggctcgat
tRNA gene sequence 
GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACT
CCTATTATCGGCACCA
Downstream region at tRNA end position 
ctccctcttc
Secondary structure (Cloverleaf model)
>SRA1004676	Thr	CGT
                   t      ACCA ctccctcttc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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