The detailed information of tRNA gene sequence


Sequence ID>SRA1004678
Genome IDSRR006906.100624
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 196
End posion on genome 120
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaagaag
tRNA gene sequence 
GGCTACGTAGCTCAGCTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAA
TCCCGTCGTAGCCACCA
Downstream region at tRNA end position 
tctctttttt
Secondary structure (Cloverleaf model)
>SRA1004678	Met	CAT
                   g      ACCA tctctttttt
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
      C G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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