The detailed information of tRNA gene sequence


Sequence ID>SRA1004679
Genome IDSRR006906.100624
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 103
End posion on genome 19
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position
ttttgcattt
tRNA gene sequence
GCGGGAGTGGCGAAATTGGTAGACGCACCAGATTTAGGTTCTGGCGCCGCAAGGTGTGCG
AGTTCAAGTCTCGCCTCCCGCACCA
Downstream region at tRNA end position
tttctcttca
Secondary structure (Cloverleaf model)
>SRA1004679	Leu	TAG
                   t      ACCA tttctcttca
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     C G C T C     A
      T A A        G      | | | | |     A
    T       A G C G       G C G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        A     CGCCGCAAGGTGT
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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