The detailed information of tRNA gene sequence


Sequence ID>W1810321713
Genome IDPUBZ01000040
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon llansteffanensis CA052B [PUBZ]
Start position on genome 334
End posion on genome 409
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cattgaaaat
tRNA gene sequence 
GGGGCGCTGGCGCAATTGGTAGCGCAACGGTTTTGCATACCGTAGGTTAGGAGTTCGAGT
CTCCTGCGCTCCACCA
Downstream region at tRNA end position 
gaaccttaac
Secondary structure (Cloverleaf model)
>W1810321713	Ala	TGC
                   t      ACCA gaaccttaac
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     C - G          T G
                    T     T C C T C     A
      T A A        G      | | | | |     G
    T       C G C G       A G G A G     C
    G       | | | |                 T T
    G       G C G C
      T A          A     AGGTT
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       T
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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