The detailed information of tRNA gene sequence


Sequence ID>W1810321728
Genome IDPUBZ01000087
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon llansteffanensis CA052B [PUBZ]
Start position on genome 36233
End posion on genome 36159
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
cccgcctgtt
tRNA gene sequence 
GGCGACATAGCCAAGTGGTAAGGCAGTGGTCTGCAAAACCGCGATCCATGGGTTCGAATC
CCATTGTCGCCTCCA
Downstream region at tRNA end position 
aatgatcaaa
Secondary structure (Cloverleaf model)
>W1810321728	Cys	GCA
                   t      TCCA aatgatcaaa
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     T A C C C     A
        G A        A      | | | | |     G
      T     A C C G       A T G G G     C
      G       | | |                 T T
      G     A G G C
        T A        A     GATCC
                    G - C
                    T + G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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