The detailed information of tRNA gene sequence


Sequence ID>W1810321731
Genome IDPUBZ01000091
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon llansteffanensis CA052B [PUBZ]
Start position on genome 49057
End posion on genome 48981
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ctcaagataT
tRNA gene sequence 
GAAATAGTAGCTCAATTGGAAGAGCACTGGCCTCCAACTCCGGGGATGTGGGTTCAAGGC
CCACCTATTTCAGCC
Downstream region at tRNA end position 
Aagctcgcgc
Secondary structure (Cloverleaf model)
>W1810321731	Trp	CCA
                   T      AGCC Aagctcgcgc
                     G - C
                     A - T
                     A - T
                     A - T
                     T - A
                     A - T
                     G - C          G G
                    T     C A C C C     A
      T A A        A      | | | | |     A
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A A          A     GGAT
                    C - G
                    T + G
                    G - C
                    G - C
                    C   T
                  C       C
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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