The detailed information of tRNA gene sequence


Sequence ID>W1810321732
Genome IDPUBZ01000093
Search identical group
Phylum/ClassChloroflexota
SpeciesHerpetosiphon llansteffanensis CA052B [PUBZ]
Start position on genome 58394
End posion on genome 58470
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
ctcaacattg
tRNA gene sequence 
GCGGGCGTAGCTCAGTTGGATAGAGCATCGGTCTTCTAAACCGACGGTCGTGGGTTCGAG
TCCCGCCGTCCGTGCCA
Downstream region at tRNA end position 
atcccttttt
Secondary structure (Cloverleaf model)
>W1810321732	Arg	TCT
                   g      GCCA atcccttttt
                     G + T
                     C - G
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T G
                    T     C G C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     CGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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