The detailed information of tRNA gene sequence


Sequence ID>SRA1004682
Genome IDSRR006906.101312
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 187
End posion on genome 93
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcttctccaa
tRNA gene sequence 
GGAAGATCCTCGTCCCCGGTGGGGCGGCCGGACTTCAAATCCGGTTGGGGCCGCCAGCGG
TCCTGGGCAGGTTCGACTCCTGTGATCTTCCGCCA
Downstream region at tRNA end position 
aattactgtt
Secondary structure (Cloverleaf model)
>SRA1004682	SeC	TCA
                   a      GCCA aattactgtt
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     T - A
                     C - G          T C
                    C     T G T C C     A
      C C C        T      + | | | |     G
    G       C T G C       G C A G G     C
    G       | + | |                 T T
    T       G G C G
      G G          G     TTGGGGCCGCCAGCGGTCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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