The detailed information of tRNA gene sequence


Sequence ID>SRA1004684
Genome IDSRR006906.102094
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 126
End posion on genome 36
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctttgcccat
tRNA gene sequence 
GGAGAGATGGCTGAGTGGTTGAAAGCACCGGTCTTGAAAACCGGCATACGTTAATAGCGT
ATCTAGGGTTCAAATCCCTATCTCTCCGCCA
Downstream region at tRNA end position 
tttttaaagt
Secondary structure (Cloverleaf model)
>SRA1004684	Ser	TGA
                   t      GCCA tttttaaagt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     A T C C C     A
      T G A        G      | | | | |     A
    G       G T C G       T A G G G     C
    G         | | |                 T T
    T       A A G C
      T G A        A     CATACGTTAATAGCGTATC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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