The detailed information of tRNA gene sequence


Sequence ID>SRA1004685
Genome IDSRR006906.102390
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 55
End posion on genome 141
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
ttgtgacagt
tRNA gene sequence 
GCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGTTAGTGTTCTTACGGACGTG
AGGGTTCAAGTCCCTCTCTTCGCACCA
Downstream region at tRNA end position 
cgcaaaatgt
Secondary structure (Cloverleaf model)
>SRA1004685	Leu	CAG
                   t      ACCA cgcaaaatgt
                     G - C
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C C C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTTCTTACGGACGT
                    C - G
                    T - A
                    A - T
                    G + T
                    C - G
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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