The detailed information of tRNA gene sequence


Sequence ID>SRA1004693
Genome IDSRR006906.104420
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 200
End posion on genome 125
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position
ccacttttgt
tRNA gene sequence
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGCATGGCATGCAAGAGGTCGACGGTTCGATC
CCGTCTAGCTCCACCA
Downstream region at tRNA end position
ccaatttaaa
Secondary structure (Cloverleaf model)
>SRA1004693	Ala	GGC
                   t      ACCA ccaatttaaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     C T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       G A C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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