The detailed information of tRNA gene sequence


Sequence ID>SRA1004711
Genome IDSRR006906.110888
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 46
End posion on genome 121
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
tgcacttgat
tRNA gene sequence 
GCCGGCTTAGCTCAGTAGGTAGAGCAACTGACTTGTAATCAGTAGGTCACCAGTTCGATT
CCGGTAGCCGGCACCA
Downstream region at tRNA end position 
ttcaagtcac
Secondary structure (Cloverleaf model)
>SRA1004711	Thr	TGT
                   t      ACCA ttcaagtcac
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     T - A          T T
                    T     T G G C C     A
      T G A        A      | | |   |     G
    A       C T C G       A C C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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