The detailed information of tRNA gene sequence


Sequence ID>SRA1004722
Genome IDSRR006906.113573
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 230
End posion on genome 155
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ttctggtttt
tRNA gene sequence 
GGGGGTGTAGCTCAGCTGGGAGAGCGGCTGCTTTGCAAGCAGTAGGTAGCGGGTTCGAGT
CCTGTCACCTCCACCA
Downstream region at tRNA end position 
atctttattc
Secondary structure (Cloverleaf model)
>SRA1004722	Ala	TGC
                   t      ACCA atctttattc
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     T G T C C     A
      C G A        A      + | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTA
                    G + T
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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