The detailed information of tRNA gene sequence


Sequence ID>SRA1004728
Genome IDSRR006906.115301
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 85
End posion on genome 9
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
accccacatt
tRNA gene sequence 
CGGAGCATAGCACAGCCTGGTAGTGCACCTGGTTTGGGACCAGGGGGTCGTAGGTTCGAA
TCCTACTGCTCCGACCA
Downstream region at tRNA end position 
cctttaaann
Secondary structure (Cloverleaf model)
>SRA1004728	Pro	TGG
                   t      ACCA cctttaaann
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     A - T          T A
                    T     C A T C C     A
      C G A        A      | | | | |     G
    C       C A C G       G T A G G     C
    T       | | | |                 T T
    G       G T G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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