The detailed information of tRNA gene sequence


Sequence ID>SRA1004729
Genome IDSRR006906.115542
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 231
End posion on genome 158
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ttcaaggtaa
tRNA gene sequence 
GGCGCGTTGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTGAACCTCGGTTCGACTCC
GGGACGCGCCTCCA
Downstream region at tRNA end position 
ttctctcctt
Secondary structure (Cloverleaf model)
>SRA1004729	Cys	GCA
                   a      TCCA ttctctcctt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     GAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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