The detailed information of tRNA gene sequence


Sequence ID>SRA1004731
Genome IDSRR006906.117051
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 161
End posion on genome 237
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gcctctcctt
tRNA gene sequence 
TGCGGGGTGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCGGCCCCCGCATCCA
Downstream region at tRNA end position 
tatttttatg
Secondary structure (Cloverleaf model)
>SRA1004731	Met	CAT
                   t      TCCA tatttttatg
                     T - A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      T G A        G      | + + | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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