The detailed information of tRNA gene sequence


Sequence ID>SRA1004741
Genome IDSRR006906.120451
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 100
End posion on genome 15
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cacgacacct
tRNA gene sequence 
GCCCTGGTGGCGGAATTGGTAGACGCGCTGGTTTCAGGTACCAGTGTTCACAAGACGTGG
AGGTTCGAGTCCTCTCCTGGGCACCA
Downstream region at tRNA end position 
cttgtcgcaa
Secondary structure (Cloverleaf model)
>SRA1004741	Leu	CAG
                   t      ACCA cttgtcgcaa
                     G - C
                     C - G
                     C - G
                     C - G
                     T   T
                     G - C
                     G - C          T G
                    T     T C T C C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTTCACAAGACGT
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  T       T
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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