The detailed information of tRNA gene sequence


Sequence ID>SRA1004774
Genome IDSRR006906.133464
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 134
End posion on genome 45
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcaaacaatt
tRNA gene sequence 
GGAAGAGTGGCAGAGCGGTTGAATGCACCAGTCTTGAAAACTGGCGAGGATGAAAGTCCT
CCGTGAGTTCGAATCTCACCTCTTCCGCCA
Downstream region at tRNA end position 
aatatcaata
Secondary structure (Cloverleaf model)
>SRA1004774	Ser	TGA
                   t      GCCA aatatcaata
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     A - T
                     G - C          T A
                    T     C A C T C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G A G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGAGGATGAAAGTCCTCC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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