The detailed information of tRNA gene sequence


Sequence ID>SRA1004779
Genome IDSRR006906.135142
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 136
End posion on genome 222
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position
tttttcccga
tRNA gene sequence
GCCCGGATGGTGGAATCGGTAGACACAAGGGATTTAAAATCCCTCGGCGTTCGCGCTGTG
CGGGTTCAAGTCCCGCTCCGGGTACCA
Downstream region at tRNA end position
tgggaaagac
Secondary structure (Cloverleaf model)
>SRA1004779	Leu	TAA
                   a      ACCA tgggaaagac
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    C       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        A     CGGCGTTCGCGCTGT
                    A - T
                    G - C
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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