The detailed information of tRNA gene sequence


Sequence ID>SRA1004799
Genome IDSRR006906.140728
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 92
End posion on genome 16
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position
tcgacattgc
tRNA gene sequence
AGGGGCGTAGTTCCAATTGGTAGAACAGCGGTCTCCAAAACCGATGGTTGCGGGTTCGAG
TCCTGCCGCCCCTGCCA
Downstream region at tRNA end position
cttcttattt
Secondary structure (Cloverleaf model)
>SRA1004799	Trp	CCA
                   c      GCCA cttcttattt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C G T C C     A
      A A C        A      | | + | |     G
    T       C T T G       G C G G G     C
    T       | | | |                 T T
    G       G A A C
      G T A        A     TGGTT
                    G   A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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