The detailed information of tRNA gene sequence


Sequence ID>SRA1004801
Genome IDSRR006906.142513
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 149
End posion on genome 223
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
tcgaaacttt
tRNA gene sequence 
GGGGGTATAGCTCAGTTGGCTAGAGTACTTGCATGGCATGCAAGGGGTCATGGGTTCGAA
TCCCATTATCTCCACat
Downstream region at tRNA end position 
aaaaccagtc
Secondary structure (Cloverleaf model)
>SRA1004801	Ala	GGC
                   t      ACat aaaaccagtc
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     T - A
                     A - T          T A
                    T     T A C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T G G G     C
    G       | | | +                 T T
    G       G A G T
      C T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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