The detailed information of tRNA gene sequence


Sequence ID>SRA1004805
Genome IDSRR006906.143046
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 29
End posion on genome 105
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aagaatcggt
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAG
CCCCGTCCGTTCCGCCA
Downstream region at tRNA end position 
cttatttaat
Secondary structure (Cloverleaf model)
>SRA1004805	Asp	GTC
                   t      GCCA cttatttaat
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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