The detailed information of tRNA gene sequence


Sequence ID>SRA1004806
Genome IDSRR006906.143046
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 157
End posion on genome 232
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
agcgagattt
tRNA gene sequence 
AGGGGCGTAGCTCAGTTGGTAGAGCACCGGTCTCCAAAACCGGGTGTCGCGAGTTCGAGT
CTCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tattaagaac
Secondary structure (Cloverleaf model)
>SRA1004806	Trp	CCA
                   t      GCCA tattaagaac
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C T C T C     A
      T G A        A      |   | | |     G
    T       C T C G       G C G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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