The detailed information of tRNA gene sequence


Sequence ID>SRA1004811
Genome IDSRR006906.144061
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 94
End posion on genome 179
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gcgagttact
tRNA gene sequence 
GGAGAAATGGCAGAGCGGTCGAATGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTTTCTCCGCtg
Downstream region at tRNA end position 
gtttattcaa
Secondary structure (Cloverleaf model)
>SRA1004811	Ser	TGA
                   t      GCtg gtttattcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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