The detailed information of tRNA gene sequence


Sequence ID>SRA1004819
Genome IDSRR006906.146503
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 128
End posion on genome 44
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttgagctt
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTAATGGAGCAGATTGCTAATCTGTCGACGAGCAATCGTCGCC
AGGGTTCGAGTCCCTGTCTCTCCGCtt
Downstream region at tRNA end position 
tttattttgc
Secondary structure (Cloverleaf model)
>SRA1004819	Ser	GCT
                   t      GCtt tttattttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T G
                    T     G T C C C     A
        G A        G      | | | | |     G
      T     G A C C       C A G G G     C
      G       | | |                 T T
      G     A T G G
        T A        A     CGACGAGCAATCGTCGC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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