The detailed information of tRNA gene sequence


Sequence ID>SRA1004827
Genome IDSRR006906.153361
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 10
End posion on genome 86
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ngttttcgga
tRNA gene sequence 
CGCGGGGTGGAGCAGCCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTCGGTTCAAA
TCCGGCCCCCGCAACCA
Downstream region at tRNA end position 
ctttccttta
Secondary structure (Cloverleaf model)
>SRA1004827	Met	CAT
                   a      ACCA ctttccttta
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C G G C C     A
      C G A        G      | + | | |     A
    C       C G A G       G T C G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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