The detailed information of tRNA gene sequence


Sequence ID>SRA1004828
Genome IDSRR006906.154126
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 156
End posion on genome 80
Amino Acid Arg
Anticodon TCT
Upstream region at tRNA start position 
catcggtcat
tRNA gene sequence 
GCGCCTGTAGCTCAGTTGGATAGAGCATCCGCCTTCTAAGCGGATGGTCACAGGTTCGAA
TCCTGTCAGGCGCGCCA
Downstream region at tRNA end position 
tttggtagat
Secondary structure (Cloverleaf model)
>SRA1004828	Arg	TCT
                   t      GCCA tttggtagat
                     G - C
                     C - G
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    T - A
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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