The detailed information of tRNA gene sequence


Sequence ID>SRA1004840
Genome IDSRR006906.159835
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 193
End posion on genome 119
Amino Acid Arg
Anticodon CCG
Upstream region at tRNA start position 
tgttgccgac
tRNA gene sequence 
GCTCTCGTGGTGAAATGGATATCACGTAGCCCTCCGGAGGCTGAGTTCTAGGTTCGATCC
CTAGCGAGAGCGCCA
Downstream region at tRNA end position 
atgcttactc
Secondary structure (Cloverleaf model)
>SRA1004840	Arg	CCG
                   c      GCCA atgcttactc
                     G - C
                     C - G
                     T - A
                     C - G
                     T - A
                     C - G
                     G - C          C T
                    T     G A T C C     A
      T A A        G      | | | | |     G
    G       A G T G       C T A G G     C
    G       | | | |                 T T
    A       T C A C
      T A          G     AGTT
                    T + G
                    A - T
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    C C G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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