The detailed information of tRNA gene sequence


Sequence ID>SRA1004843
Genome IDSRR006906.160509
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 181
End posion on genome 106
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position
ccggctcgat
tRNA gene sequence
GCCGATATAGCTCAGTTGGTAGAGCAGCGCATTCGTAATGCGAAGGTCGTAGGTTCGACT
CCTATTATCGGCACCA
Downstream region at tRNA end position
ctccctcttc
Secondary structure (Cloverleaf model)
>SRA1004843	Thr	CGT
                   t      ACCA ctccctcttc
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     T - A
                     A - T          T C
                    T     T A T C C     A
      T G A        A      + | | | |     G
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    G   A
                    C - G
                    G - C
                    C - G
                    A - T
                  T       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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