The detailed information of tRNA gene sequence


Sequence ID>SRA1004849
Genome IDSRR006906.161555
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 100
End posion on genome 176
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
actaaaacac
tRNA gene sequence 
GGGGGATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAACGGTTCGAC
TCCGTTATTCTCCACAA
Downstream region at tRNA end position 
gatgctgaat
Secondary structure (Cloverleaf model)
>SRA1004849	Ala	TGC
                   c      ACAA gatgctgaat
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T T G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A A C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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