The detailed information of tRNA gene sequence


Sequence ID>W1810339313
Genome IDPUUG01000001
Search identical group
Phylum/ClassMycoplasmatota
SpeciesCandidatus Phytoplasma phoenicium phoenicium ChiP [PUUG]
Start position on genome 20772
End posion on genome 20684
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aatttttttc
tRNA gene sequence 
GGAGAAATACTCAAGTGGTTAAAGAGGCACGCTTGGAAAGCGTGTAGTTCTTAATAGATG
CGAGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
acttttttat
Secondary structure (Cloverleaf model)
>W1810339313	Ser	GGA
                   c      GCCA acttttttat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    G       A C T C       G A G G G     C
    G         | | |                 T T
    T       A G A G
      T A A        G     TAGTTCTTAATAGATGC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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