The detailed information of tRNA gene sequence


Sequence ID>SRA1004858
Genome IDSRR006906.164715
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 106
End posion on genome 30
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position
aaacctctac
tRNA gene sequence
AGGCTTGTAGCTCAGGTGGTTAGAGCGCACCCCTGATAAGGGTGAGGTCGGTGGTTCAAG
TCCACTCAGGCCTACCA
Downstream region at tRNA end position
gattcgctcc
Secondary structure (Cloverleaf model)
>SRA1004858	Ile	GAT
                   c      ACCA gattcgctcc
                     A - T
                     G - C
                     G - C
                     C - G
                     T + G
                     T - A
                     G - C          T G
                    T     T C A C C     A
      G G A        A      + | | | |     A
    T       C T C G       G G T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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