The detailed information of tRNA gene sequence


Sequence ID>SRA1004862
Genome IDSRR006906.165012
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 57
End posion on genome 130
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
acagaataaa
tRNA gene sequence 
GGCGCGTTAACAAAGCGGTTATGTAGCGGATTGCAAATCCGTCCAGTCCGGTTCGACTCC
GGAACGCGCCTCCA
Downstream region at tRNA end position 
actttcccga
Secondary structure (Cloverleaf model)
>SRA1004862	Cys	GCA
                   a      TCCA actttcccga
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     A G G C C     A
        G A        A      | | | | |     G
      C     A A C A       T C C G G     C
      G       | | |                 T T
      G     A T G T
        T T        A     CCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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