The detailed information of tRNA gene sequence


Sequence ID>SRA1004864
Genome IDSRR006906.165268
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 163
End posion on genome 76
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gctccctccc
tRNA gene sequence 
GGAGGGTTGGCCGAGTGGTAAGGCAGCGGCTTGCTAAGCCGTAGTCGGGGGCAACCCCGC
GCGCGTTCGATCCGCGCACCCTCCGCCG
Downstream region at tRNA end position 
cgtacgacga
Secondary structure (Cloverleaf model)
>SRA1004864	Ser	GCT
                   c      GCCG cgtacgacga
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          C T
                    T     C G C G C     A
        G A        G      | | | | |     G
      T     G C C G       G C G C G     C
      G       | | |                 T T
      G     A G G C
        T A        A     AGTCGGGGGCAACCCCGC
                    G + T
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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