The detailed information of tRNA gene sequence


Sequence ID>SRA1004868
Genome IDSRR006906.166289
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 197
End posion on genome 122
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
nnnnnnncgc
tRNA gene sequence 
GGAGCGGTAGTTCAGTCGGTTGAATACCTGCCTGTCACGCAGGGGGTCGCGGGTTCGAGT
CCCGTCCGTTCCGCCA
Downstream region at tRNA end position 
ctattcactc
Secondary structure (Cloverleaf model)
>SRA1004868	Asp	GTC
                   c      GCCA ctattcactc
                     G - C
                     G - C
                     A - T
                     G + T
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T          A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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