The detailed information of tRNA gene sequence


Sequence ID>SRA1004870
Genome IDSRR006906.166915
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 29
End posion on genome 105
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgcacgttga
tRNA gene sequence 
TGCGGGATGGAGCAGTCTGGTAGCTCGTCGGGCTCATAACCCGAAGGTCGTTGGTTCAAA
TCCAGCTCCCGCTACCA
Downstream region at tRNA end position 
agtttctaag
Secondary structure (Cloverleaf model)
>SRA1004870	Met	CAT
                   a      ACCA agtttctaag
                     T   T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G A C C     A
      T G A        G      | + | | |     A
    C       C G A G       G T T G G     C
    T       | | | |                 T T
    G       G C T C
      G T A        G     AGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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