The detailed information of tRNA gene sequence


Sequence ID>SRA1004871
Genome IDSRR006906.167004
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 231
End posion on genome 155
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaaaaagat
tRNA gene sequence 
GGCTACGTAGCTCAGTTGGTTAGAGCACATCACTCATAATGATGGGGTCACAGGTTCGAA
TCCCGTCGTAGCCACCA
Downstream region at tRNA end position 
tctttttgcg
Secondary structure (Cloverleaf model)
>SRA1004871	Met	CAT
                   t      ACCA tctttttgcg
                     G - C
                     G - C
                     C - G
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     T G C C C     A
      T G A        A      | |   | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    A - T
                    T - A
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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