The detailed information of tRNA gene sequence


Sequence ID>SRA1004878
Genome IDSRR006906.169109
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 84
End posion on genome 10
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcgcggctT
tRNA gene sequence 
GGCCCCTTAGCTCAGTGGTTAGAGCAGGCGACTCATAATCGCTTGGTCGTTGGTTCAAAC
CCAACAGGGGCTGAga
Downstream region at tRNA end position 
cacgcaannn
Secondary structure (Cloverleaf model)
>SRA1004878	Met	CAT
                   T      GAga cacgcaannn
                     G + T
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A          C A
                    T     C A A C C     A
      T G A        A      | | | | |     A
    G       C T C G       G T T G G     C
    G       | | | |                 T T
    T       G A G C
      T A          A     TGGTC
                    G + T
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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