The detailed information of tRNA gene sequence


Sequence ID>SRA1004879
Genome IDSRR006906.169171
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 222
End posion on genome 149
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
gagtgtcaga
tRNA gene sequence
GGCGCGTTGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTGGACCTCGGTTCGACTCC
GGGACGCGCCTCCA
Downstream region at tRNA end position
tttgcgacac
Secondary structure (Cloverleaf model)
>SRA1004879	Cys	GCA
                   a      TCCA tttgcgacac
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     GGAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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