The detailed information of tRNA gene sequence


Sequence ID>SRA1004883
Genome IDSRR006906.170449
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 232
End posion on genome 159
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position
ttcaaggtaa
tRNA gene sequence
GGCGCGTTGGCAGAGTGGCCATGCAGCGGATTGCAAATCCGTGAACCTCGGTTCGACTCC
GGGACGCGCCTCCA
Downstream region at tRNA end position
ttctctcctt
Secondary structure (Cloverleaf model)
>SRA1004883	Cys	GCA
                   a      TCCA ttctctcctt
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     G G G C C     A
        G A        G      | + | | |     G
      T     G A C G       C T C G G     C
      G       | | |                 T T
      G     A T G C
        C C        A     GAAC
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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