The detailed information of tRNA gene sequence


Sequence ID>SRA1004894
Genome IDSRR006906.175199
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 252
End posion on genome 168
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atttacaaat
tRNA gene sequence 
GCGGAAGTGGCGGAATTGGTAGACGCGCTGGATTTAGGTTCCAGTATCTTCGGATGTGAG
AGTTCAAGTCTCTCTTTCCGCACCA
Downstream region at tRNA end position 
tgttctttca
Secondary structure (Cloverleaf model)
>SRA1004894	Leu	TAG
                   t      ACCA tgttctttca
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T          T G
                    T     C T C T C     A
      T A A        G      | | | | |     A
    T       G G C G       G A G A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TATCTTCGGATGT
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  T       T
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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