The detailed information of tRNA gene sequence


Sequence ID>SRA1004896
Genome IDSRR006906.175556
Search identical group
Phylum/Classmetagenomic water samples (SRP000427)
Species
Start position on genome 240
End posion on genome 165
Amino Acid Thr
Anticodon TGT
Upstream region at tRNA start position 
actaagaaac
tRNA gene sequence 
GCCGGCATAGCTCAGTTGGTAGAGCAACTGACTTGTAATCAGTAGGTCCACAGTTCGAAT
CCGTGTGCCGGCACCA
Downstream region at tRNA end position 
tcttaaagtg
Secondary structure (Cloverleaf model)
>SRA1004896	Thr	TGT
                   c      ACCA tcttaaagtg
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C
                     C - G
                     A - T          T A
                    T     G T G C C     A
      T G A        A      | | |   |     G
    T       C T C G       C A C A G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTC
                    A - T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    T G T
Intron
Comment/Decision
Genome/Seq. Info.[SRA]

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